Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm26013-201ENSMUST00000104404 119 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm14219-201ENSMUST00000120414 288 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm5257-201ENSMUST00000121823 790 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm18304-201ENSMUST00000189162 546 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm19009-201ENSMUST00000223072 823 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.29□□□□□ -0.76
Col8a1Q00780 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a1Q00780 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm11354-201ENSMUST00000121974 422 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm4862-201ENSMUST00000170405 438 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC10.28□□□□□ -0.76
Col8a1Q00780 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a1Q00780 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col8a1Q00780 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms