Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm45550-201ENSMUST00000209380 946 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.62□□□□□ -0.23
GabpaQ00422 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.62□□□□□ -0.23
GabpaQ00422 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GabpaQ00422 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GabpaQ00422 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GabpaQ00422 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GabpaQ00422 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.61□□□□□ -0.23
GabpaQ00422 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm22920-201ENSMUST00000102175 109 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm14585-201ENSMUST00000120713 634 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.61□□□□□ -0.23
GabpaQ00422 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GabpaQ00422 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm2553-201ENSMUST00000215986 605 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm10752-201ENSMUST00000218348 729 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GabpaQ00422 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GabpaQ00422 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GabpaQ00422 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GabpaQ00422 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.61□□□□□ -0.23
GabpaQ00422 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.6□□□□□ -0.23
GabpaQ00422 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GabpaQ00422 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GabpaQ00422 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GabpaQ00422 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.6□□□□□ -0.23
GabpaQ00422 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Gm9132-201ENSMUST00000210182 832 ntBASIC13.6□□□□□ -0.23
GabpaQ00422 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.6□□□□□ -0.23
GabpaQ00422 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.6□□□□□ -0.23
GabpaQ00422 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.6□□□□□ -0.23
GabpaQ00422 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
GabpaQ00422 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.6□□□□□ -0.23
GabpaQ00422 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GabpaQ00422 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms