Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.27□□□□□ -0.29
Hmgb1P63158 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmgb1P63158 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Gm19309-201ENSMUST00000218295 205 ntBASIC13.27□□□□□ -0.29
Hmgb1P63158 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hmgb1P63158 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.26□□□□□ -0.29
Hmgb1P63158 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm38241-201ENSMUST00000192641 898 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm38002-201ENSMUST00000193255 180 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm43433-201ENSMUST00000196573 481 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm42627-201ENSMUST00000197347 224 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm5950-201ENSMUST00000213337 772 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Hmgb1P63158 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmgb1P63158 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.26□□□□□ -0.29
Hmgb1P63158 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.25□□□□□ -0.29
Hmgb1P63158 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.25□□□□□ -0.29
Hmgb1P63158 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Gm15610-201ENSMUST00000120584 195 ntBASIC13.25□□□□□ -0.29
Hmgb1P63158 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Gm24845-201ENSMUST00000158034 109 ntBASIC13.25□□□□□ -0.29
Hmgb1P63158 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Hmgb1P63158 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.25□□□□□ -0.29
Hmgb1P63158 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.25□□□□□ -0.29
Hmgb1P63158 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmgb1P63158 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.24□□□□□ -0.29
Hmgb1P63158 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.24□□□□□ -0.29
Hmgb1P63158 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms