Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.76□□□□□ -0.53
Gli1P47806 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gli1P47806 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.76□□□□□ -0.53
Gli1P47806 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Gli1P47806 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.76□□□□□ -0.53
Gli1P47806 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.76□□□□□ -0.53
Gli1P47806 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gli1P47806 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gli1P47806 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Gli1P47806 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gli1P47806 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.75□□□□□ -0.53
Gli1P47806 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Gli1P47806 Gm12176-201ENSMUST00000121420 875 ntBASIC11.75□□□□□ -0.53
Gli1P47806 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Gm22902-201ENSMUST00000158488 302 ntBASIC11.75□□□□□ -0.53
Gli1P47806 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.75□□□□□ -0.53
Gli1P47806 Gm38092-201ENSMUST00000195600 653 ntBASIC11.75□□□□□ -0.53
Gli1P47806 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.75□□□□□ -0.53
Gli1P47806 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.75□□□□□ -0.53
Gli1P47806 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.75□□□□□ -0.53
Gli1P47806 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gli1P47806 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.75□□□□□ -0.53
Gli1P47806 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.74□□□□□ -0.53
Gli1P47806 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.74□□□□□ -0.53
Gli1P47806 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.74□□□□□ -0.53
Gli1P47806 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.74□□□□□ -0.53
Gli1P47806 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.74□□□□□ -0.53
Gli1P47806 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Gm11434-201ENSMUST00000122379 629 ntBASIC11.74□□□□□ -0.53
Gli1P47806 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Gli1P47806 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.74□□□□□ -0.53
Gli1P47806 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.74□□□□□ -0.53
Gli1P47806 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.74□□□□□ -0.53
Gli1P47806 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Gli1P47806 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Gli1P47806 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.74□□□□□ -0.53
Gli1P47806 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Gli1P47806 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gli1P47806 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms