Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.37□□□□□ -0.43
HttP42859 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Gm22495-201ENSMUST00000104492 126 ntBASIC12.37□□□□□ -0.43
HttP42859 Gm15329-201ENSMUST00000121408 155 ntBASIC12.37□□□□□ -0.43
HttP42859 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.37□□□□□ -0.43
HttP42859 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.37□□□□□ -0.43
HttP42859 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.37□□□□□ -0.43
HttP42859 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.37□□□□□ -0.43
HttP42859 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.37□□□□□ -0.43
HttP42859 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.37□□□□□ -0.43
HttP42859 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.37□□□□□ -0.43
HttP42859 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.37□□□□□ -0.43
HttP42859 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.37□□□□□ -0.43
HttP42859 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.37□□□□□ -0.43
HttP42859 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HttP42859 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
HttP42859 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HttP42859 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HttP42859 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.37□□□□□ -0.43
HttP42859 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC12.37□□□□□ -0.43
HttP42859 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Gm9102-201ENSMUST00000219250 465 ntBASIC12.37□□□□□ -0.43
HttP42859 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.37□□□□□ -0.43
HttP42859 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.36□□□□□ -0.43
HttP42859 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gm16210-201ENSMUST00000122161 610 ntBASIC12.36□□□□□ -0.43
HttP42859 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.36□□□□□ -0.43
HttP42859 Gm24312-201ENSMUST00000178677 119 ntBASIC12.36□□□□□ -0.43
HttP42859 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.36□□□□□ -0.43
HttP42859 Gm20091-201ENSMUST00000179683 189 ntBASIC12.36□□□□□ -0.43
HttP42859 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.36□□□□□ -0.43
HttP42859 Gm6478-201ENSMUST00000099450 742 ntBASIC12.36□□□□□ -0.43
HttP42859 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.36□□□□□ -0.43
HttP42859 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC12.36□□□□□ -0.43
HttP42859 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HttP42859 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HttP42859 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Mir1190-201ENSMUST00000116925 96 ntBASIC12.36□□□□□ -0.43
HttP42859 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gm4705-201ENSMUST00000177415 354 ntBASIC12.36□□□□□ -0.43
HttP42859 Gm29689-201ENSMUST00000221076 589 ntBASIC12.36□□□□□ -0.43
HttP42859 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HttP42859 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.36□□□□□ -0.43
HttP42859 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.36□□□□□ -0.43
HttP42859 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.36□□□□□ -0.43
HttP42859 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HttP42859 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.35□□□□□ -0.43
HttP42859 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.35□□□□□ -0.43
HttP42859 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.35□□□□□ -0.43
HttP42859 Gm44917-201ENSMUST00000208798 520 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms