Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.08□□□□□ -1.12
Rpl28P41105 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm14704-201ENSMUST00000120300 874 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm37042-201ENSMUST00000193816 581 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm4768-201ENSMUST00000206199 686 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Gm7067-201ENSMUST00000207698 1249 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Gm29705-201ENSMUST00000212598 474 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 AC155237.1-201ENSMUST00000226196 1279 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm10146-201ENSMUST00000072739 309 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm14608-201ENSMUST00000120030 1553 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rpl28P41105 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm11424-201ENSMUST00000121929 829 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC8.07□□□□□ -1.12
Rpl28P41105 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC8.07□□□□□ -1.12
Rpl28P41105 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm4271-201ENSMUST00000174444 973 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC8.07□□□□□ -1.12
Rpl28P41105 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.07□□□□□ -1.12
Rpl28P41105 AC140375.2-201ENSMUST00000225283 584 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Cdk7-205ENSMUST00000225990 1159 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm10012-201ENSMUST00000078252 192 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms