Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Gm22614-201ENSMUST00000178300 165 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.85□□□□□ -0.51
Cd9P40240 AY036118-201ENSMUST00000200021 923 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Gm2553-201ENSMUST00000215986 605 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cd9P40240 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cd9P40240 Gm22042-201ENSMUST00000082989 165 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Gm26110-201ENSMUST00000083971 165 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cd9P40240 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd9P40240 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.85□□□□□ -0.51
Cd9P40240 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cd9P40240 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd9P40240 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Cd9P40240 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd9P40240 Gm11960-201ENSMUST00000122068 925 ntBASIC11.84□□□□□ -0.51
Cd9P40240 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.84□□□□□ -0.51
Cd9P40240 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Gm27320-201ENSMUST00000184892 109 ntBASIC11.84□□□□□ -0.51
Cd9P40240 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.84□□□□□ -0.51
Cd9P40240 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cd9P40240 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.84□□□□□ -0.51
Cd9P40240 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Cd9P40240 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cd9P40240 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cd9P40240 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.84□□□□□ -0.51
Cd9P40240 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cd9P40240 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd9P40240 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cd9P40240 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cd9P40240 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd9P40240 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.83□□□□□ -0.52
Cd9P40240 Gm44967-201ENSMUST00000207047 631 ntBASIC11.83□□□□□ -0.52
Cd9P40240 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.83□□□□□ -0.52
Cd9P40240 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.83□□□□□ -0.52
Cd9P40240 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd9P40240 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd9P40240 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd9P40240 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd9P40240 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd9P40240 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms