Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm25053-201ENSMUST00000103982 133 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm25922-201ENSMUST00000104281 130 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.33□□□□□ -0.44
Cxcl12P40224 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm24679-201ENSMUST00000158762 111 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm17070-201ENSMUST00000170463 784 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm7719-201ENSMUST00000182374 975 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm5700-201ENSMUST00000191483 989 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm25053-202ENSMUST00000199731 132 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm7082-201ENSMUST00000209880 969 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcl12P40224 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.33□□□□□ -0.44
Cxcl12P40224 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cxcl12P40224 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm22594-201ENSMUST00000104251 130 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm6630-201ENSMUST00000119199 454 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm14213-201ENSMUST00000119778 768 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm5706-201ENSMUST00000181525 993 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Mir6941-201ENSMUST00000184711 59 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm18801-201ENSMUST00000186616 536 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm43912-201ENSMUST00000204352 538 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm40879-201ENSMUST00000220759 612 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.32□□□□□ -0.44
Cxcl12P40224 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl12P40224 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cxcl12P40224 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcl12P40224 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.31□□□□□ -0.44
Cxcl12P40224 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm11619-201ENSMUST00000117474 237 ntBASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.31□□□□□ -0.44
Cxcl12P40224 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms