Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm14219-201ENSMUST00000120414 288 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm14247-201ENSMUST00000120950 237 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm11660-201ENSMUST00000120955 412 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm24398-201ENSMUST00000157870 109 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm24844-201ENSMUST00000158679 127 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sftpa1P35242 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm18059-201ENSMUST00000208073 580 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm9111-201ENSMUST00000219394 709 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Grk6-205ENSMUST00000224653 2976 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.09□□□□□ -0.63
Sftpa1P35242 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm20392-201ENSMUST00000173047 701 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Sftpa1P35242 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.09□□□□□ -0.63
Sftpa1P35242 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sftpa1P35242 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.08□□□□□ -0.63
Sftpa1P35242 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms