Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Nedd8P29595 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Nedd8P29595 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.04□□□□□ -0.64
Nedd8P29595 Gm22121-201ENSMUST00000175148 54 ntBASIC11.04□□□□□ -0.64
Nedd8P29595 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Gm9136-201ENSMUST00000193368 454 ntBASIC11.04□□□□□ -0.64
Nedd8P29595 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Gm9797-201ENSMUST00000052902 613 ntBASIC11.04□□□□□ -0.64
Nedd8P29595 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nedd8P29595 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nedd8P29595 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Nedd8P29595 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nedd8P29595 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Nedd8P29595 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nedd8P29595 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nedd8P29595 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nedd8P29595 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Gm13453-201ENSMUST00000118708 357 ntBASIC11.03□□□□□ -0.64
Nedd8P29595 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Gm27430-201ENSMUST00000184585 107 ntBASIC11.03□□□□□ -0.64
Nedd8P29595 Gm44333-201ENSMUST00000197168 107 ntBASIC11.03□□□□□ -0.64
Nedd8P29595 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.03□□□□□ -0.64
Nedd8P29595 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nedd8P29595 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.03□□□□□ -0.64
Nedd8P29595 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Nedd8P29595 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nedd8P29595 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.02□□□□□ -0.64
Nedd8P29595 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Nedd8P29595 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.02□□□□□ -0.64
Nedd8P29595 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.02□□□□□ -0.64
Nedd8P29595 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nedd8P29595 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Nedd8P29595 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Nedd8P29595 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.02□□□□□ -0.65
Nedd8P29595 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.02□□□□□ -0.65
Nedd8P29595 Gm44397-201ENSMUST00000195950 113 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms