Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.31□□□□□ -0.28
RarbP22605 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RarbP22605 Gm12579-201ENSMUST00000118040 783 ntBASIC13.31□□□□□ -0.28
RarbP22605 Gm5419-201ENSMUST00000119301 527 ntBASIC13.31□□□□□ -0.28
RarbP22605 Gm14247-201ENSMUST00000120950 237 ntBASIC13.31□□□□□ -0.28
RarbP22605 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.31□□□□□ -0.28
RarbP22605 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.31□□□□□ -0.28
RarbP22605 Gm17877-201ENSMUST00000192578 814 ntBASIC13.31□□□□□ -0.28
RarbP22605 Gm44329-201ENSMUST00000197469 112 ntBASIC13.31□□□□□ -0.28
RarbP22605 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.31□□□□□ -0.28
RarbP22605 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RarbP22605 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.31□□□□□ -0.28
RarbP22605 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RarbP22605 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.3□□□□□ -0.28
RarbP22605 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.3□□□□□ -0.28
RarbP22605 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RarbP22605 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Gm15004-201ENSMUST00000119192 630 ntBASIC13.3□□□□□ -0.28
RarbP22605 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.3□□□□□ -0.28
RarbP22605 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.3□□□□□ -0.28
RarbP22605 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.3□□□□□ -0.28
RarbP22605 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.3□□□□□ -0.28
RarbP22605 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Gm21092-201ENSMUST00000178995 955 ntBASIC13.3□□□□□ -0.28
RarbP22605 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.3□□□□□ -0.28
RarbP22605 Gm5714-201ENSMUST00000197343 566 ntBASIC13.3□□□□□ -0.28
RarbP22605 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.3□□□□□ -0.28
RarbP22605 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.3□□□□□ -0.28
RarbP22605 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.3□□□□□ -0.28
RarbP22605 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RarbP22605 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RarbP22605 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
RarbP22605 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RarbP22605 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.29□□□□□ -0.28
RarbP22605 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RarbP22605 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RarbP22605 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RarbP22605 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.29□□□□□ -0.28
RarbP22605 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.29□□□□□ -0.28
RarbP22605 Mir1956-201ENSMUST00000157748 65 ntBASIC13.29□□□□□ -0.28
RarbP22605 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RarbP22605 Gm25951-201ENSMUST00000175330 64 ntBASIC13.29□□□□□ -0.28
RarbP22605 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.29□□□□□ -0.28
RarbP22605 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.29□□□□□ -0.28
RarbP22605 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.29□□□□□ -0.28
RarbP22605 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms