Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rb1P13405 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rb1P13405 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rb1P13405 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.41□□□□□ -0.42
Rb1P13405 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rb1P13405 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Rb1P13405 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.4□□□□□ -0.42
Rb1P13405 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Gm23200-201ENSMUST00000104379 132 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.4□□□□□ -0.42
Rb1P13405 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.4□□□□□ -0.42
Rb1P13405 Gm12015-201ENSMUST00000117065 843 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Rb1P13405 Gm32999-201ENSMUST00000192693 562 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.4□□□□□ -0.42
Rb1P13405 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.4□□□□□ -0.42
Rb1P13405 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.4□□□□□ -0.42
Rb1P13405 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rb1P13405 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.4□□□□□ -0.42
Rb1P13405 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rb1P13405 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rb1P13405 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rb1P13405 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rb1P13405 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rb1P13405 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rb1P13405 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rb1P13405 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rb1P13405 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rb1P13405 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.39□□□□□ -0.43
Rb1P13405 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.39□□□□□ -0.43
Rb1P13405 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.39□□□□□ -0.43
Rb1P13405 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Rb1P13405 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.39□□□□□ -0.43
Rb1P13405 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.39□□□□□ -0.43
Rb1P13405 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.39□□□□□ -0.43
Rb1P13405 Gm18730-201ENSMUST00000218038 343 ntBASIC12.39□□□□□ -0.43
Rb1P13405 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.39□□□□□ -0.43
Rb1P13405 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.39□□□□□ -0.43
Rb1P13405 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rb1P13405 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rb1P13405 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rb1P13405 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.39□□□□□ -0.43
Rb1P13405 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms