Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TnfP06804 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.72□□□□□ -0.37
TnfP06804 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TnfP06804 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TnfP06804 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.72□□□□□ -0.37
TnfP06804 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.72□□□□□ -0.37
TnfP06804 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.72□□□□□ -0.37
TnfP06804 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
TnfP06804 Gm8815-201ENSMUST00000173809 620 ntBASIC12.72□□□□□ -0.37
TnfP06804 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TnfP06804 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
TnfP06804 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.72□□□□□ -0.37
TnfP06804 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.72□□□□□ -0.37
TnfP06804 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TnfP06804 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.71□□□□□ -0.37
TnfP06804 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TnfP06804 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.71□□□□□ -0.37
TnfP06804 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TnfP06804 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
TnfP06804 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TnfP06804 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Gm12616-201ENSMUST00000118594 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Gm13263-201ENSMUST00000121271 838 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TnfP06804 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.71□□□□□ -0.37
TnfP06804 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Gm12624-201ENSMUST00000177615 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12621-201ENSMUST00000177760 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12615-201ENSMUST00000177970 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12622-201ENSMUST00000177975 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12627-201ENSMUST00000178412 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12625-201ENSMUST00000179122 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12614-201ENSMUST00000179586 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm12613-201ENSMUST00000180323 382 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Gm27390-201ENSMUST00000184516 176 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm37835-201ENSMUST00000193305 361 ntBASIC12.71□□□□□ -0.37
TnfP06804 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.71□□□□□ -0.37
TnfP06804 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TnfP06804 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TnfP06804 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TnfP06804 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TnfP06804 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TnfP06804 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TnfP06804 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TnfP06804 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TnfP06804 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.7□□□□□ -0.38
TnfP06804 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.7□□□□□ -0.38
TnfP06804 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms