Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.11□□□□□ -0.79
Hoxa3P02831 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm12380-201ENSMUST00000119012 544 ntBASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm12566-201ENSMUST00000121479 359 ntBASIC10.11□□□□□ -0.79
Hoxa3P02831 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm43138-201ENSMUST00000199123 708 ntBASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm19208-201ENSMUST00000213861 912 ntBASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.11□□□□□ -0.79
Hoxa3P02831 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Hoxa3P02831 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hoxa3P02831 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.1□□□□□ -0.79
Hoxa3P02831 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Gm5616-201ENSMUST00000165252 384 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Gm8741-201ENSMUST00000174736 384 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms