Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CopeO89079 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CopeO89079 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.37□□□□□ -0.43
CopeO89079 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.37□□□□□ -0.43
CopeO89079 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.37□□□□□ -0.43
CopeO89079 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CopeO89079 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CopeO89079 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.36□□□□□ -0.43
CopeO89079 Gm12058-201ENSMUST00000118614 437 ntBASIC12.36□□□□□ -0.43
CopeO89079 Gm12490-201ENSMUST00000120255 560 ntBASIC12.36□□□□□ -0.43
CopeO89079 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.36□□□□□ -0.43
CopeO89079 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.36□□□□□ -0.43
CopeO89079 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CopeO89079 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.36□□□□□ -0.43
CopeO89079 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.36□□□□□ -0.43
CopeO89079 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.36□□□□□ -0.43
CopeO89079 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.36□□□□□ -0.43
CopeO89079 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CopeO89079 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.35□□□□□ -0.43
CopeO89079 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
CopeO89079 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.35□□□□□ -0.43
CopeO89079 Gm16379-201ENSMUST00000161469 348 ntBASIC12.35□□□□□ -0.43
CopeO89079 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Gm8762-201ENSMUST00000193486 339 ntBASIC12.35□□□□□ -0.43
CopeO89079 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.35□□□□□ -0.43
CopeO89079 Gm40466-201ENSMUST00000212174 422 ntBASIC12.35□□□□□ -0.43
CopeO89079 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.35□□□□□ -0.43
CopeO89079 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CopeO89079 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CopeO89079 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.34□□□□□ -0.43
CopeO89079 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms