Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp72F8VQC1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp72F8VQC1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp72F8VQC1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp72F8VQC1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp72F8VQC1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm6023-201ENSMUST00000118217 606 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm13875-201ENSMUST00000120162 282 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Mir1982-201ENSMUST00000157368 74 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm42693-201ENSMUST00000196779 631 ntBASIC11.79□□□□□ -0.52
Srp72F8VQC1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp72F8VQC1 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm10434-201ENSMUST00000101158 471 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm12036-201ENSMUST00000120008 530 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm13316-201ENSMUST00000140537 691 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.78□□□□□ -0.52
Srp72F8VQC1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Srp72F8VQC1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms