Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.08□□□□□ -0.47
Ccdc188F6WEU2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc188F6WEU2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc188F6WEU2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Ccdc188F6WEU2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm8019-201ENSMUST00000119317 587 ntBASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm14165-201ENSMUST00000121456 952 ntBASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm4943-201ENSMUST00000132879 424 ntBASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc188F6WEU2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Mir453-201ENSMUST00000104732 82 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm11475-201ENSMUST00000118482 476 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Capsl-202ENSMUST00000226688 739 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm5468-202ENSMUST00000227851 682 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc188F6WEU2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Gm15136-201ENSMUST00000120552 533 ntBASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Gm11736-201ENSMUST00000121468 505 ntBASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 AA623943-201ENSMUST00000121794 354 ntBASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Gm7765-201ENSMUST00000182585 974 ntBASIC12.06□□□□□ -0.48
Ccdc188F6WEU2 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms