Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Mospd4-201ENSMUST00000180618 576 ntBASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm5370-201ENSMUST00000187187 574 ntBASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm43133-201ENSMUST00000197472 463 ntBASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm5950-201ENSMUST00000213337 772 ntBASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Ccdc112A0AUP1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gm38241-201ENSMUST00000192641 898 ntBASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gm42627-201ENSMUST00000197347 224 ntBASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc112A0AUP1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm15824-201ENSMUST00000119516 955 ntBASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm4986-201ENSMUST00000119731 549 ntBASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms