Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav6n-6A0A075B6B2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Mir1982-201ENSMUST00000157368 74 ntBASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Cog3-203ENSMUST00000227473 4197 ntBASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm1335-201ENSMUST00000121653 386 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms