Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.85□□□□□ -0.83
Trav18A0A075B656 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trav18A0A075B656 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm28882-201ENSMUST00000185504 314 ntBASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm42693-201ENSMUST00000196779 631 ntBASIC9.84□□□□□ -0.83
Trav18A0A075B656 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.84□□□□□ -0.83
Trav18A0A075B656 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.84□□□□□ -0.83
Trav18A0A075B656 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav18A0A075B656 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.84□□□□□ -0.83
Trav18A0A075B656 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav18A0A075B656 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Trav18A0A075B656 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm5370-201ENSMUST00000187187 574 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms