Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Gm27390-201ENSMUST00000184516 176 ntBASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcb1Q9Z0H3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Mir3547-201ENSMUST00000175461 88 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm29499-201ENSMUST00000189151 486 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm28329-201ENSMUST00000191208 689 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm29171-201ENSMUST00000191397 486 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm37835-201ENSMUST00000193305 361 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm38117-201ENSMUST00000194653 939 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm45118-201ENSMUST00000208928 825 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcb1Q9Z0H3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm7666-201ENSMUST00000146631 819 ntBASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm3508-201ENSMUST00000186012 792 ntBASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms