Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.36□□□□□ -0.59
Trim3Q9R1R2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm23270-201ENSMUST00000104055 131 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm12314-201ENSMUST00000118104 538 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm25668-201ENSMUST00000157700 129 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm26083-201ENSMUST00000157904 193 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim3Q9R1R2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm14999-201ENSMUST00000121039 624 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm17376-201ENSMUST00000166016 84 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm39404-201ENSMUST00000216350 313 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim3Q9R1R2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms