Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 AC164087.2-201ENSMUST00000216206 1072 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Gm14942-201ENSMUST00000119642 336 ntBASIC14.05□□□□□ -0.16
Scn11aQ9R053 Gm12030-201ENSMUST00000121917 223 ntBASIC14.05□□□□□ -0.16
Scn11aQ9R053 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.05□□□□□ -0.16
Scn11aQ9R053 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn11aQ9R053 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm22442-201ENSMUST00000157256 144 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm5298-201ENSMUST00000201122 892 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm13019-201ENSMUST00000120000 276 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm14395-201ENSMUST00000120494 563 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm12783-201ENSMUST00000121425 397 ntBASIC14.04□□□□□ -0.16
Scn11aQ9R053 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn11aQ9R053 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms