Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm27430-201ENSMUST00000184585 107 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm44333-201ENSMUST00000197168 107 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm9063-201ENSMUST00000223299 582 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm9522-201ENSMUST00000182394 926 ntBASIC10.76□□□□□ -0.69
Trem1Q9JKE2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trem1Q9JKE2 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm42826-201ENSMUST00000197548 2639 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm26464-201ENSMUST00000157094 305 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms