Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.85□□□□□ -0.67
Krt88Q9CPR6 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm45930-201ENSMUST00000221330 292 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Krt88Q9CPR6 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Krt88Q9CPR6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm12314-201ENSMUST00000118104 538 ntBASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms