Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm23745-201ENSMUST00000104230 125 ntBASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm9372-201ENSMUST00000168454 430 ntBASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm35960-201ENSMUST00000202712 767 ntBASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh15Q99PJ1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Mir6953-201ENSMUST00000184745 68 ntBASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Gm42660-201ENSMUST00000197733 947 ntBASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdh15Q99PJ1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm8152-201ENSMUST00000120842 637 ntBASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm37207-201ENSMUST00000194284 296 ntBASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm43564-201ENSMUST00000196185 211 ntBASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh15Q99PJ1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Gm22344-201ENSMUST00000122642 278 ntBASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Gm25343-201ENSMUST00000157460 107 ntBASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Gm4903-201ENSMUST00000210462 405 ntBASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Prss23os-202ENSMUST00000179361 1362 ntBASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh15Q99PJ1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms