Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.13□□□□□ -0.47
Cdk9Q99J95 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Gm6266-201ENSMUST00000203844 806 ntBASIC12.13□□□□□ -0.47
Cdk9Q99J95 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk9Q99J95 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.12□□□□□ -0.47
Cdk9Q99J95 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm11803-201ENSMUST00000119966 444 ntBASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm25857-201ENSMUST00000082788 129 ntBASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm24526-201ENSMUST00000082921 158 ntBASIC12.12□□□□□ -0.47
Cdk9Q99J95 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.12□□□□□ -0.47
Cdk9Q99J95 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk9Q99J95 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.11□□□□□ -0.47
Cdk9Q99J95 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm8810-201ENSMUST00000172895 754 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 123.6 ms