Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm5070-201ENSMUST00000177599 862 ntBASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdha3Q91Y16 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Gm23912-201ENSMUST00000104687 87 ntBASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Gm15236-201ENSMUST00000117309 379 ntBASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Gm19994-201ENSMUST00000217086 586 ntBASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms