Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb22Q91XZ8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb22Q91XZ8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb22Q91XZ8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb22Q91XZ8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.07□□□□□ -0.16
Pcdhb22Q91XZ8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm15004-201ENSMUST00000119192 630 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm18351-201ENSMUST00000188646 883 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm19287-201ENSMUST00000203190 358 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm18212-201ENSMUST00000211678 889 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm5705-201ENSMUST00000066241 711 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb22Q91XZ8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm23949-201ENSMUST00000104027 127 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm14542-201ENSMUST00000118460 1248 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm11660-201ENSMUST00000120955 412 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm14441-201ENSMUST00000121960 540 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm28071-201ENSMUST00000190355 478 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm4157-201ENSMUST00000211647 679 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm270-201ENSMUST00000223010 976 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb22Q91XZ8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 155.7 ms