Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Morn2-202ENSMUST00000227729 656 ntBASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps39Q8R5L3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm37424-201ENSMUST00000191727 561 ntBASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.05□□□□□ -0.48
Vps39Q8R5L3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps39Q8R5L3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm43118-201ENSMUST00000199149 775 ntBASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps39Q8R5L3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms