Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.16□□□□□ -0.46
Slf1Q8R3P9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.15□□□□□ -0.46
Slf1Q8R3P9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slf1Q8R3P9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.15□□□□□ -0.47
Slf1Q8R3P9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.15□□□□□ -0.47
Slf1Q8R3P9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slf1Q8R3P9 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Mir339-201ENSMUST00000083659 96 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Slf1Q8R3P9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slf1Q8R3P9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms