Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc87Q8CDL9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm12314-201ENSMUST00000118104 538 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm27501-201ENSMUST00000183599 107 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm43179-201ENSMUST00000198797 275 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc87Q8CDL9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc87Q8CDL9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Olfr284-202ENSMUST00000206647 966 ntBASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc87Q8CDL9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms