Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 AC165351.1-201ENSMUST00000219078 2020 ntBASIC16.8■□□□□ 0.28
Usp54Q8BL06 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 AC153962.2-201ENSMUST00000219417 550 ntBASIC16.8■□□□□ 0.28
Usp54Q8BL06 AC154589.2-201ENSMUST00000228847 251 ntBASIC16.8■□□□□ 0.28
Usp54Q8BL06 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp54Q8BL06 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm13445-201ENSMUST00000121664 307 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm24992-201ENSMUST00000157412 130 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm42430-201ENSMUST00000197209 616 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm44323-201ENSMUST00000198689 129 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm7902-201ENSMUST00000198842 947 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm44647-201ENSMUST00000207402 428 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm19640-201ENSMUST00000214849 464 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm7224-201ENSMUST00000121359 2066 ntBASIC16.79■□□□□ 0.28
Usp54Q8BL06 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp54Q8BL06 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm44190-201ENSMUST00000205083 1401 ntBASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm42433-201ENSMUST00000196806 940 ntBASIC16.78■□□□□ 0.28
Usp54Q8BL06 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm7525-201ENSMUST00000219425 454 ntBASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC16.78■□□□□ 0.28
Usp54Q8BL06 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp54Q8BL06 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm8111-201ENSMUST00000117659 987 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm14740-201ENSMUST00000118538 1150 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm15329-201ENSMUST00000121408 155 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm5257-201ENSMUST00000121823 790 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms