Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm28064-201ENSMUST00000185639 858 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm9230-201ENSMUST00000188228 532 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm38241-201ENSMUST00000192641 898 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.93□□□□□ -0.5
Ubp1Q811S7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubp1Q811S7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubp1Q811S7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Mir877-201ENSMUST00000104738 85 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Rprl1-202ENSMUST00000198476 238 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 CT572999.1-201ENSMUST00000220315 1260 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.92□□□□□ -0.5
Ubp1Q811S7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms