Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm11628-201ENSMUST00000117568 171 ntBASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Gm25072-201ENSMUST00000175233 235 ntBASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Gm8531-201ENSMUST00000188319 893 ntBASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup98Q6PFD9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.96□□□□□ -0.18
Nup98Q6PFD9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup98Q6PFD9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm23694-201ENSMUST00000179335 110 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm37826-201ENSMUST00000195329 322 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.94□□□□□ -0.18
Nup98Q6PFD9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup98Q6PFD9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms