Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Gm6606-201ENSMUST00000193613 947 ntBASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarca2Q6DIC0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Gm5449-201ENSMUST00000081132 357 ntBASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Gm6641-201ENSMUST00000196100 1315 ntBASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Gm12461-201ENSMUST00000120231 1239 ntBASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Gm37452-201ENSMUST00000194416 1160 ntBASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarca2Q6DIC0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Gm24279-201ENSMUST00000104236 131 ntBASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 AC154759.1-201ENSMUST00000224137 1159 ntBASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Smarca2Q6DIC0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Gm14005-210ENSMUST00000225087 1413 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Gm19692-201ENSMUST00000203856 2084 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Mir744-201ENSMUST00000103261 100 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Gm13171-201ENSMUST00000117233 391 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Mir6973a-201ENSMUST00000183646 78 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 AC115304.2-201ENSMUST00000226399 332 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Rps3a2-201ENSMUST00000074245 792 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Rps3a3-201ENSMUST00000074680 795 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Gm7224-201ENSMUST00000121359 2066 ntBASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarca2Q6DIC0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Gm43249-201ENSMUST00000200464 458 ntBASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Gm45310-201ENSMUST00000210436 275 ntBASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 CT030170.2-201ENSMUST00000223267 126 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms