Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm19214-201ENSMUST00000191956 1083 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm6140-201ENSMUST00000192494 966 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm7238-201ENSMUST00000206467 973 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.83□□□□□ -0.36
Foxd4Q60688 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Gm44090-201ENSMUST00000204669 1834 ntBASIC12.83□□□□□ -0.36
Foxd4Q60688 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Foxd4Q60688 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxd4Q60688 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm25317-201ENSMUST00000116824 129 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm11618-201ENSMUST00000117946 267 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Snora78-201ENSMUST00000158630 128 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm27847-201ENSMUST00000183711 107 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm27375-201ENSMUST00000183799 107 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm37560-201ENSMUST00000194289 1000 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 AC102352.1-201ENSMUST00000224187 582 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 AC154484.1-201ENSMUST00000227311 771 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm26437-201ENSMUST00000082595 105 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Foxd4Q60688 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.82□□□□□ -0.36
Foxd4Q60688 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxd4Q60688 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm13612-201ENSMUST00000119276 390 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm17420-201ENSMUST00000164753 153 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm26238-201ENSMUST00000175538 117 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm21301-201ENSMUST00000189476 699 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm38154-201ENSMUST00000195444 340 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 AC156574.1-201ENSMUST00000227084 452 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms