Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm6621-201ENSMUST00000193251 772 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm9368-201ENSMUST00000219348 831 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm8712-201ENSMUST00000221090 701 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.33□□□□□ -0.75
Trav5d-4Q5R1F6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm35960-201ENSMUST00000202712 767 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5d-4Q5R1F6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms