Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.51□□□□□ -0.25
Srrm1Q52KI8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Gm13916-201ENSMUST00000117368 628 ntBASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Gm19009-201ENSMUST00000223072 823 ntBASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Gm8325-201ENSMUST00000099086 453 ntBASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm1Q52KI8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm22920-201ENSMUST00000102175 109 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm44158-201ENSMUST00000203881 505 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm18059-201ENSMUST00000208073 580 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm45594-201ENSMUST00000211717 241 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Mt1-202ENSMUST00000211807 1085 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm5705-201ENSMUST00000066241 711 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm1Q52KI8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm14193-201ENSMUST00000105067 153 ntBASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm8737-201ENSMUST00000122208 642 ntBASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm20392-201ENSMUST00000173047 701 ntBASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm8956-201ENSMUST00000203939 825 ntBASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Srrm1Q52KI8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms