Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm14633-201ENSMUST00000121152 470 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm8618-201ENSMUST00000097570 432 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm26931-201ENSMUST00000182273 609 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm7833-201ENSMUST00000183288 990 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm43163-201ENSMUST00000196571 442 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm44917-201ENSMUST00000208798 520 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm8255-201ENSMUST00000218693 305 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm16477-201ENSMUST00000085365 801 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm17415-201ENSMUST00000096427 789 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.71□□□□□ -0.69
Chd8Q09XV5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.71□□□□□ -0.69
Chd8Q09XV5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Gm22495-201ENSMUST00000104492 126 ntBASIC10.71□□□□□ -0.69
Chd8Q09XV5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.71□□□□□ -0.69
Chd8Q09XV5 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Gm18001-201ENSMUST00000212023 688 ntBASIC10.71□□□□□ -0.69
Chd8Q09XV5 Gm5178-201ENSMUST00000219380 898 ntBASIC10.71□□□□□ -0.69
Chd8Q09XV5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd8Q09XV5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd8Q09XV5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms