Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.13□□□□□ -0.63
MitfQ08874 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.13□□□□□ -0.63
MitfQ08874 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.13□□□□□ -0.63
MitfQ08874 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MitfQ08874 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
MitfQ08874 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
MitfQ08874 Gm8213-201ENSMUST00000118191 441 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.12□□□□□ -0.63
MitfQ08874 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.12□□□□□ -0.63
MitfQ08874 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Gm9136-201ENSMUST00000193368 454 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.12□□□□□ -0.63
MitfQ08874 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Gm19163-201ENSMUST00000223313 780 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.12□□□□□ -0.63
MitfQ08874 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MitfQ08874 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
MitfQ08874 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.12□□□□□ -0.63
MitfQ08874 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.11□□□□□ -0.63
MitfQ08874 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
MitfQ08874 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.11□□□□□ -0.63
MitfQ08874 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.11□□□□□ -0.63
MitfQ08874 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Gm4984-201ENSMUST00000115987 360 ntBASIC11.11□□□□□ -0.63
MitfQ08874 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.11□□□□□ -0.63
MitfQ08874 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.11□□□□□ -0.63
MitfQ08874 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.11□□□□□ -0.63
MitfQ08874 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MitfQ08874 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.11□□□□□ -0.63
MitfQ08874 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.11□□□□□ -0.63
MitfQ08874 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.11□□□□□ -0.63
MitfQ08874 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.11□□□□□ -0.63
MitfQ08874 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.11□□□□□ -0.63
MitfQ08874 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.11□□□□□ -0.63
MitfQ08874 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms