Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Matn2-203ENSMUST00000226766 3252 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm24891-201ENSMUST00000104391 136 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm22144-201ENSMUST00000157402 102 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm23085-201ENSMUST00000157849 293 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm17391-201ENSMUST00000171036 126 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm9192-201ENSMUST00000183221 985 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm38117-201ENSMUST00000194653 939 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm44545-201ENSMUST00000208262 746 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.03□□□□□ -0.32
Col9a2Q07643 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Col9a2Q07643 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Col9a2Q07643 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a2Q07643 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a2Q07643 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a2Q07643 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Col9a2Q07643 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a2Q07643 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.02□□□□□ -0.32
Col9a2Q07643 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Gm15610-201ENSMUST00000120584 195 ntBASIC13.02□□□□□ -0.33
Col9a2Q07643 Gm4726-201ENSMUST00000135604 736 ntBASIC13.02□□□□□ -0.33
Col9a2Q07643 Gm6019-201ENSMUST00000148369 736 ntBASIC13.02□□□□□ -0.33
Col9a2Q07643 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.02□□□□□ -0.33
Col9a2Q07643 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.02□□□□□ -0.33
Col9a2Q07643 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.02□□□□□ -0.33
Col9a2Q07643 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Col9a2Q07643 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a2Q07643 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col9a2Q07643 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col9a2Q07643 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.01□□□□□ -0.33
Col9a2Q07643 Gm15566-201ENSMUST00000121130 590 ntBASIC13.01□□□□□ -0.33
Col9a2Q07643 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col9a2Q07643 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.01□□□□□ -0.33
Col9a2Q07643 Gm5714-201ENSMUST00000197343 566 ntBASIC13.01□□□□□ -0.33
Col9a2Q07643 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a2Q07643 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms