Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Col9a1Q05722 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a1Q05722 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a1Q05722 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a1Q05722 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a1Q05722 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a1Q05722 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a1Q05722 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm25507-201ENSMUST00000116981 144 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm14253-201ENSMUST00000122112 639 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm25394-201ENSMUST00000157338 133 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm8384-201ENSMUST00000190905 704 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Trdv3-201ENSMUST00000198551 309 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm44823-201ENSMUST00000204775 1107 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm3333-202ENSMUST00000221763 1044 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col9a1Q05722 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.13□□□□□ -0.47
Col9a1Q05722 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a1Q05722 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm22920-201ENSMUST00000102175 109 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm15707-201ENSMUST00000118804 996 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm12345-201ENSMUST00000119288 898 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm11836-201ENSMUST00000121022 441 ntBASIC12.12□□□□□ -0.47
Col9a1Q05722 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms