Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Rubie-203ENSMUST00000227803 2430 ntBASIC14.04□□□□□ -0.16
Pkp1P97350 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pkp1P97350 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.04□□□□□ -0.16
Pkp1P97350 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.04□□□□□ -0.16
Pkp1P97350 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pkp1P97350 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.04□□□□□ -0.16
Pkp1P97350 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pkp1P97350 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pkp1P97350 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pkp1P97350 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pkp1P97350 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.04□□□□□ -0.16
Pkp1P97350 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Gm17376-201ENSMUST00000166016 84 ntBASIC14.03□□□□□ -0.16
Pkp1P97350 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.03□□□□□ -0.16
Pkp1P97350 Gm25700-201ENSMUST00000177693 110 ntBASIC14.03□□□□□ -0.16
Pkp1P97350 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Pkp1P97350 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.03□□□□□ -0.16
Pkp1P97350 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Gm7783-201ENSMUST00000204795 781 ntBASIC14.03□□□□□ -0.16
Pkp1P97350 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Pkp1P97350 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.03□□□□□ -0.16
Pkp1P97350 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.03□□□□□ -0.16
Pkp1P97350 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pkp1P97350 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkp1P97350 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.03□□□□□ -0.16
Pkp1P97350 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pkp1P97350 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 Paupar-201ENSMUST00000194826 3482 ntBASIC14.02□□□□□ -0.16
Pkp1P97350 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.02□□□□□ -0.16
Pkp1P97350 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.02□□□□□ -0.16
Pkp1P97350 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Pkp1P97350 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.02□□□□□ -0.16
Pkp1P97350 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkp1P97350 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.02□□□□□ -0.17
Pkp1P97350 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Gm38317-201ENSMUST00000195564 343 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.02□□□□□ -0.17
Pkp1P97350 Gm44967-201ENSMUST00000207047 631 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pkp1P97350 Olfr582-201ENSMUST00000098212 960 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.02□□□□□ -0.17
Pkp1P97350 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Pkp1P97350 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkp1P97350 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pkp1P97350 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Pkp1P97350 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.01□□□□□ -0.17
Pkp1P97350 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pkp1P97350 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkp1P97350 Gm9192-201ENSMUST00000183221 985 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms