Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim43bP86448 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43bP86448 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43bP86448 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm15370-201ENSMUST00000117158 253 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43bP86448 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43bP86448 Mir8109-201ENSMUST00000184375 117 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm45865-201ENSMUST00000211815 945 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43bP86448 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43bP86448 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.4□□□□□ -0.42
Trim43bP86448 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43bP86448 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43bP86448 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Trim43bP86448 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trim43bP86448 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43bP86448 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43bP86448 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim43bP86448 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim43bP86448 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm14381-201ENSMUST00000122105 414 ntBASIC12.39□□□□□ -0.43
Trim43bP86448 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim43bP86448 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim43bP86448 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43bP86448 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms