Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shox2P70390 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shox2P70390 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shox2P70390 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Shox2P70390 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Shox2P70390 Gm23912-201ENSMUST00000104687 87 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.86□□□□□ -0.51
Shox2P70390 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.86□□□□□ -0.51
Shox2P70390 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Gm43575-201ENSMUST00000196420 516 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Gm8598-201ENSMUST00000221184 836 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.86□□□□□ -0.51
Shox2P70390 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shox2P70390 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shox2P70390 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shox2P70390 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Gm14441-201ENSMUST00000121960 540 ntBASIC11.85□□□□□ -0.51
Shox2P70390 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Gm5706-201ENSMUST00000181525 993 ntBASIC11.85□□□□□ -0.51
Shox2P70390 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.85□□□□□ -0.51
Shox2P70390 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.85□□□□□ -0.51
Shox2P70390 Mir7654-201ENSMUST00000185082 70 ntBASIC11.85□□□□□ -0.51
Shox2P70390 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.85□□□□□ -0.51
Shox2P70390 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Gm19220-201ENSMUST00000222682 803 ntBASIC11.85□□□□□ -0.51
Shox2P70390 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shox2P70390 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shox2P70390 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shox2P70390 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Shox2P70390 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms