Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.28□□□□□ -0.6
Six5P70178 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.28□□□□□ -0.6
Six5P70178 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.28□□□□□ -0.6
Six5P70178 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm22042-201ENSMUST00000082989 165 ntBASIC11.28□□□□□ -0.6
Six5P70178 Gm26110-201ENSMUST00000083971 165 ntBASIC11.28□□□□□ -0.6
Six5P70178 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.28□□□□□ -0.6
Six5P70178 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Matn2-203ENSMUST00000226766 3252 ntBASIC11.28□□□□□ -0.6
Six5P70178 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Six5P70178 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Six5P70178 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Six5P70178 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Six5P70178 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Six5P70178 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Six5P70178 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Gm11511-201ENSMUST00000118146 540 ntBASIC11.27□□□□□ -0.61
Six5P70178 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.27□□□□□ -0.61
Six5P70178 Gm12164-201ENSMUST00000121695 551 ntBASIC11.27□□□□□ -0.61
Six5P70178 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.27□□□□□ -0.61
Six5P70178 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Gm7584-201ENSMUST00000175829 940 ntBASIC11.27□□□□□ -0.61
Six5P70178 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.27□□□□□ -0.61
Six5P70178 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Six5P70178 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.27□□□□□ -0.61
Six5P70178 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Six5P70178 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Six5P70178 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Six5P70178 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.26□□□□□ -0.61
Six5P70178 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.26□□□□□ -0.61
Six5P70178 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.26□□□□□ -0.61
Six5P70178 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Six5P70178 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Six5P70178 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Six5P70178 Gm7722-201ENSMUST00000120646 741 ntBASIC11.26□□□□□ -0.61
Six5P70178 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms