Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nub1P54729 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nub1P54729 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nub1P54729 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nub1P54729 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Gm10782-202ENSMUST00000223775 1480 ntBASIC13□□□□□ -0.33
Nub1P54729 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Gm4760-201ENSMUST00000119663 1030 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13□□□□□ -0.33
Nub1P54729 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nub1P54729 Gm15276-201ENSMUST00000145953 498 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm25668-201ENSMUST00000157700 129 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm25890-201ENSMUST00000177643 165 ntBASIC13□□□□□ -0.33
Nub1P54729 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13□□□□□ -0.33
Nub1P54729 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm22614-201ENSMUST00000178300 165 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm9230-201ENSMUST00000188228 532 ntBASIC13□□□□□ -0.33
Nub1P54729 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Gm18711-201ENSMUST00000199341 750 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm43930-201ENSMUST00000203868 845 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm45224-201ENSMUST00000208203 414 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm32390-201ENSMUST00000212713 1172 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Gm22042-201ENSMUST00000082989 165 ntBASIC13□□□□□ -0.33
Nub1P54729 Gm26110-201ENSMUST00000083971 165 ntBASIC13□□□□□ -0.33
Nub1P54729 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nub1P54729 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nub1P54729 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nub1P54729 Matn2-203ENSMUST00000226766 3252 ntBASIC13□□□□□ -0.33
Nub1P54729 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.99□□□□□ -0.33
Nub1P54729 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Nub1P54729 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.99□□□□□ -0.33
Nub1P54729 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Nub1P54729 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Gm14247-201ENSMUST00000120950 237 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Gm26083-201ENSMUST00000157904 193 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Nub1P54729 Gm25700-201ENSMUST00000177693 110 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.99□□□□□ -0.33
Nub1P54729 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Gm19187-201ENSMUST00000206781 892 ntBASIC12.99□□□□□ -0.33
Nub1P54729 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.99□□□□□ -0.33
Nub1P54729 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Nub1P54729 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Nub1P54729 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nub1P54729 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nub1P54729 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nub1P54729 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nub1P54729 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nub1P54729 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms