Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.18■□□□□ 0.02
Msh6P54276 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.18■□□□□ 0.02
Msh6P54276 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.18■□□□□ 0.02
Msh6P54276 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Msh6P54276 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Msh6P54276 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.18■□□□□ 0.02
Msh6P54276 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh6P54276 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Msh6P54276 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Msh6P54276 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Gm15207-201ENSMUST00000119259 442 ntBASIC15.17■□□□□ 0.02
Msh6P54276 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Msh6P54276 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.17■□□□□ 0.02
Msh6P54276 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.17■□□□□ 0.02
Msh6P54276 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Msh6P54276 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.17■□□□□ 0.02
Msh6P54276 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.17■□□□□ 0.02
Msh6P54276 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Msh6P54276 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.17■□□□□ 0.02
Msh6P54276 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.17■□□□□ 0.02
Msh6P54276 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.17■□□□□ 0.02
Msh6P54276 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Msh6P54276 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Msh6P54276 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Msh6P54276 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Msh6P54276 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Msh6P54276 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Msh6P54276 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh6P54276 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.16■□□□□ 0.02
Msh6P54276 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.16■□□□□ 0.02
Msh6P54276 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Msh6P54276 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh6P54276 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Msh6P54276 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.15■□□□□ 0.02
Msh6P54276 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Gm26013-201ENSMUST00000104404 119 ntBASIC15.15■□□□□ 0.02
Msh6P54276 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.15■□□□□ 0.02
Msh6P54276 Gm14441-201ENSMUST00000121960 540 ntBASIC15.15■□□□□ 0.02
Msh6P54276 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms