Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm24248-201ENSMUST00000157321 322 ntBASIC18.22■□□□□ 0.51
Cux1P53564 Gm20414-201ENSMUST00000172918 646 ntBASIC18.22■□□□□ 0.51
Cux1P53564 Gm23694-201ENSMUST00000179335 110 ntBASIC18.22■□□□□ 0.51
Cux1P53564 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cux1P53564 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 AC140375.1-201ENSMUST00000225421 694 ntBASIC18.22■□□□□ 0.51
Cux1P53564 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Gm26616-202ENSMUST00000195676 3107 ntBASIC18.22■□□□□ 0.51
Cux1P53564 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Cux1P53564 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC18.21■□□□□ 0.51
Cux1P53564 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cux1P53564 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cux1P53564 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC18.21■□□□□ 0.51
Cux1P53564 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cux1P53564 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Gm9135-201ENSMUST00000182963 990 ntBASIC18.21■□□□□ 0.51
Cux1P53564 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux1P53564 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Cux1P53564 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux1P53564 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC18.21■□□□□ 0.51
Cux1P53564 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux1P53564 CT573086.4-201ENSMUST00000226729 342 ntBASIC18.21■□□□□ 0.51
Cux1P53564 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cux1P53564 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cux1P53564 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cux1P53564 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux1P53564 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Cux1P53564 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Gm19692-201ENSMUST00000203856 2084 ntBASIC18.2■□□□□ 0.5
Cux1P53564 Gm11500-201ENSMUST00000118237 601 ntBASIC18.2■□□□□ 0.5
Cux1P53564 Gm12783-201ENSMUST00000121425 397 ntBASIC18.2■□□□□ 0.5
Cux1P53564 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Gm37638-201ENSMUST00000194337 1123 ntBASIC18.2■□□□□ 0.5
Cux1P53564 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
Cux1P53564 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Gm17435-202ENSMUST00000212699 1998 ntBASIC18.2■□□□□ 0.5
Cux1P53564 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC18.2■□□□□ 0.5
Cux1P53564 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cux1P53564 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux1P53564 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cux1P53564 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cux1P53564 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cux1P53564 Gm7541-201ENSMUST00000118361 535 ntBASIC18.19■□□□□ 0.5
Cux1P53564 Gm4862-201ENSMUST00000170405 438 ntBASIC18.19■□□□□ 0.5
Cux1P53564 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cux1P53564 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cux1P53564 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cux1P53564 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cux1P53564 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cux1P53564 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cux1P53564 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux1P53564 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux1P53564 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cux1P53564 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC18.18■□□□□ 0.5
Cux1P53564 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms